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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889206.1_cds_XP_016443904.1_39017
CDS Infomation

[gene=LOC107769217] [db_xref=GeneID:107769217] [protein=upstream activation factor subunit spp27-like isoform X4] [protein_id=XP_016443904.1] [location=complement(join(47446..47571,48791..48966,49138..49194,49555..49729,49836..49947,50569..50882))] [gbkey=CDS]
Sequence

ATGGTGTCGGATTCCGTATTGGTTGATCGGCTCCGGGAAATTCTCAAAGTTTCCGACCTT
GAAACTACCACCGCCGGCAGTGTTCGTCGGAAGCTTGAGGAGGAATTCGGGGTTGACTTA
AATGACAGAAAAGCCTTTATCAGAGACCAAATTGACCTTTTCCTTCGAACCCATGTTGAG
GAAACCCCGAACGACGACGTACAAGAAGTAGAACAAGAACAAGAAACAGAGAATGTGAAG
GAAGAGGAAAATGATGATTCTTGCTCCCAAGAAGAAGAGAATGAGACTGATACAGGGGCA
AAGGAGAAAGCTCGGTCTGAGAAAATGAATGGAGAAGCAAAGAAAAAAGGGGGCTTTAAC
AAGCCATGCGCACTTTCACCACAGCTTCAGAAATTGGTTGGCGAGTCCGAACTGGGCAGA
CCAGAGGTTGTTAAGAAGATTTGGGCCTATATCCGGGAGAAGAATTTACAAAACCCACAG
AACAAGCGGAAAATTTTATGTGATGAAGTTTTGAGTGAAATTTTCCGGGCCAAAACAATC
GACATGTTCCAGATGAACAAGGTGCTATCCAAGCACATTTGGCCCATAGATGAGGAAGAT
GCCAGTCAAGTCAAATCCTCTGTGAAGAAAAGGCTACCGAAACAAGGAAGAGAAGAAGCT
TTAGATGAGCCAAAGCAGAAAGAGAAAAGGCACAAAGGGGGAGGATCTGGTTTTCTTGCT
CCAGTTCGGTTATCAGATGCCCTTGTAAAATTCTTTGGTATTGGTGAAAATGCATTAACT
CGAGCTGATGTTATCAAGCGAATATGGCAGTATATAAAAGAAAATGAGCTGCAGGATCCA
TCTGATAAGAAGACAATAATCTGCGATGAAAGGTTAAAAGAACTATTTCAAGTTGATTCC
TTCCATGGCTTCACAGTTACAAAGCTCTTGACTGCTCATTTTATCAAAAGAGAAGACTGA

Peptide Sequence

PEP ID

XP_016443904.1
PEP Infomation

PREDICTED: upstream activation factor subunit spp27-like isoform X4 [Nicotiana tabacum]
Sequence

MVSDSVLVDRLREILKVSDLETTTAGSVRRKLEEEFGVDLNDRKAFIRDQIDLFLRTHVE
ETPNDDVQEVEQEQETENVKEEENDDSCSQEEENETDTGAKEKARSEKMNGEAKKKGGFN
KPCALSPQLQKLVGESELGRPEVVKKIWAYIREKNLQNPQNKRKILCDEVLSEIFRAKTI
DMFQMNKVLSKHIWPIDEEDASQVKSSVKKRLPKQGREEALDEPKQKEKRHKGGGSGFLA
PVRLSDALVKFFGIGENALTRADVIKRIWQYIKENELQDPSDKKTIICDERLKELFQVDS
FHGFTVTKLLTAHFIKRED

Transcript Sequence

Gene sequence data has not been registered.